Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.86□□□□□ -0.67
RPL39P62891 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 AC116407.3-201ENST00000623905 1129 ntBASIC10.86□□□□□ -0.67
RPL39P62891 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.86□□□□□ -0.67
RPL39P62891 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
RPL39P62891 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
RPL39P62891 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
RPL39P62891 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
RPL39P62891 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RPL39P62891 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.85□□□□□ -0.67
RPL39P62891 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.85□□□□□ -0.67
RPL39P62891 AC142381.1-201ENST00000426099 345 ntBASIC10.85□□□□□ -0.67
RPL39P62891 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.85□□□□□ -0.67
RPL39P62891 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 AC099522.2-201ENST00000607001 744 ntBASIC10.85□□□□□ -0.67
RPL39P62891 AC026979.3-201ENST00000607315 403 ntBASIC10.85□□□□□ -0.67
RPL39P62891 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.85□□□□□ -0.67
RPL39P62891 AL773604.1-201ENST00000617417 272 ntBASIC10.85□□□□□ -0.67
RPL39P62891 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
RPL39P62891 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
RPL39P62891 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
RPL39P62891 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
RPL39P62891 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.85□□□□□ -0.67
RPL39P62891 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms