Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ERVFC1-1P60608 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 AL591684.3-201ENST00000605187 298 ntBASIC11.97□□□□□ -0.49
ERVFC1-1P60608 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 AC018892.3-201ENST00000623986 2499 ntBASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 AC083964.2-201ENST00000623988 2396 ntBASIC11.97□□□□□ -0.49
ERVFC1-1P60608 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
ERVFC1-1P60608 AC015909.5-201ENST00000624336 2266 ntBASIC11.97□□□□□ -0.49
ERVFC1-1P60608 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
ERVFC1-1P60608 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms