Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.81■□□□□ 0.44
RHBDL3P58872 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.81■□□□□ 0.44
RHBDL3P58872 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RHBDL3P58872 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
RHBDL3P58872 AL662890.1-201ENST00000396818 632 ntBASIC17.81■□□□□ 0.44
RHBDL3P58872 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.81■□□□□ 0.44
RHBDL3P58872 ALG3P1-201ENST00000508806 1114 ntBASIC17.81■□□□□ 0.44
RHBDL3P58872 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RHBDL3P58872 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.81■□□□□ 0.44
RHBDL3P58872 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 AC008825.2-201ENST00000603374 718 ntBASIC17.81■□□□□ 0.44
RHBDL3P58872 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.81■□□□□ 0.44
RHBDL3P58872 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.81■□□□□ 0.44
RHBDL3P58872 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.81■□□□□ 0.44
RHBDL3P58872 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.81■□□□□ 0.44
RHBDL3P58872 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RHBDL3P58872 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.81■□□□□ 0.44
RHBDL3P58872 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RHBDL3P58872 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 AC006058.4-201ENST00000624016 1670 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RHBDL3P58872 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.8■□□□□ 0.44
RHBDL3P58872 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.8■□□□□ 0.44
RHBDL3P58872 PPT1-215ENST00000641471 2368 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.8■□□□□ 0.44
RHBDL3P58872 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.8■□□□□ 0.44
RHBDL3P58872 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 RPL18P13-201ENST00000478088 569 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.8■□□□□ 0.44
RHBDL3P58872 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.8■□□□□ 0.44
RHBDL3P58872 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.8■□□□□ 0.44
RHBDL3P58872 RN7SL163P-201ENST00000583100 276 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.8■□□□□ 0.44
RHBDL3P58872 AC097724.1-201ENST00000609581 426 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RHBDL3P58872 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.8■□□□□ 0.44
RHBDL3P58872 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.8■□□□□ 0.44
RHBDL3P58872 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.8■□□□□ 0.44
RHBDL3P58872 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.8■□□□□ 0.44
RHBDL3P58872 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RHBDL3P58872 AC244394.1-201ENST00000435000 1665 ntBASIC17.8■□□□□ 0.44
RHBDL3P58872 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RHBDL3P58872 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 AL162727.3-201ENST00000635661 2787 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 VDAC1P1-201ENST00000439229 848 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 MARK2P5-201ENST00000507649 634 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.79■□□□□ 0.44
RHBDL3P58872 AC131206.1-201ENST00000538078 1211 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RHBDL3P58872 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 AC026740.1-201ENST00000607068 791 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 BX088702.1-201ENST00000610784 235 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RHBDL3P58872 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RHBDL3P58872 AC008741.2-201ENST00000612792 3115 ntBASIC17.79■□□□□ 0.44
RHBDL3P58872 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms