Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RIPK4P57078 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RIPK4P57078 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.92■□□□□ 0.78
RIPK4P57078 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 MECR-202ENST00000373791 2416 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 AC006001.1-201ENST00000325130 474 ntBASIC19.92■□□□□ 0.78
RIPK4P57078 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 AC099336.1-201ENST00000417053 1171 ntBASIC19.92■□□□□ 0.78
RIPK4P57078 AC026954.1-201ENST00000429771 1293 ntBASIC19.92■□□□□ 0.78
RIPK4P57078 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.92■□□□□ 0.78
RIPK4P57078 ECM1P1-201ENST00000604092 1279 ntBASIC19.92■□□□□ 0.78
RIPK4P57078 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 RHOXF1P1-202ENST00000635473 501 ntBASIC19.92■□□□□ 0.78
RIPK4P57078 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.92■□□□□ 0.78
RIPK4P57078 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RIPK4P57078 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RIPK4P57078 AGAP7P-201ENST00000582299 2062 ntBASIC19.91■□□□□ 0.78
RIPK4P57078 AGAP14-201ENST00000624701 2060 ntBASIC19.91■□□□□ 0.78
RIPK4P57078 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.91■□□□□ 0.78
RIPK4P57078 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.91■□□□□ 0.78
RIPK4P57078 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.91■□□□□ 0.78
RIPK4P57078 POM121L8P-201ENST00000417732 1281 ntBASIC19.91■□□□□ 0.78
RIPK4P57078 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.91■□□□□ 0.78
RIPK4P57078 POM121L9P-203ENST00000441984 1285 ntBASIC19.91■□□□□ 0.78
RIPK4P57078 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.91■□□□□ 0.78
RIPK4P57078 AL603764.1-201ENST00000636452 321 ntBASIC19.91■□□□□ 0.78
RIPK4P57078 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK4P57078 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
RIPK4P57078 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.91■□□□□ 0.78
RIPK4P57078 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK4P57078 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RIPK4P57078 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.91■□□□□ 0.78
RIPK4P57078 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC19.9■□□□□ 0.78
RIPK4P57078 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.9■□□□□ 0.78
RIPK4P57078 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RIPK4P57078 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RIPK4P57078 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 TPM3P8-201ENST00000330554 643 ntBASIC19.9■□□□□ 0.78
RIPK4P57078 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.9■□□□□ 0.78
RIPK4P57078 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.9■□□□□ 0.78
RIPK4P57078 CSF2RBP1-201ENST00000447905 391 ntBASIC19.9■□□□□ 0.78
RIPK4P57078 FO681548.1-201ENST00000455617 1132 ntBASIC19.9■□□□□ 0.78
RIPK4P57078 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.9■□□□□ 0.78
RIPK4P57078 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.9■□□□□ 0.78
RIPK4P57078 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.9■□□□□ 0.78
RIPK4P57078 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.9■□□□□ 0.78
RIPK4P57078 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.9■□□□□ 0.78
RIPK4P57078 AC138951.2-201ENST00000623455 1161 ntBASIC19.9■□□□□ 0.78
RIPK4P57078 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RIPK4P57078 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms