Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLDN17P56750 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN17P56750 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 SOCS2P1-201ENST00000417727 557 ntBASIC13.66□□□□□ -0.22
CLDN17P56750 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.66□□□□□ -0.22
CLDN17P56750 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CLDN17P56750 TP53TG3HP-202ENST00000569755 579 ntBASIC13.66□□□□□ -0.22
CLDN17P56750 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 CTBP2P3-201ENST00000585629 1255 ntBASIC13.66□□□□□ -0.22
CLDN17P56750 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN17P56750 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CLDN17P56750 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN17P56750 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN17P56750 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 ZBED1P1-201ENST00000502364 1930 ntBASIC13.66□□□□□ -0.22
CLDN17P56750 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN17P56750 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN17P56750 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN17P56750 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN17P56750 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN17P56750 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLDN17P56750 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 CRB3P1-201ENST00000449338 276 ntBASIC13.65□□□□□ -0.22
CLDN17P56750 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN17P56750 AP001582.1-201ENST00000525856 295 ntBASIC13.65□□□□□ -0.22
CLDN17P56750 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN17P56750 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN17P56750 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN17P56750 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN17P56750 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.65□□□□□ -0.22
CLDN17P56750 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLDN17P56750 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CLDN17P56750 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CLDN17P56750 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN17P56750 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms