Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NR1H2P55055 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H2P55055 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H2P55055 AC152010.1-201ENST00000415779 2006 ntBASIC14.59□□□□□ -0.07
NR1H2P55055 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 AL139400.1-201ENST00000366220 510 ntBASIC14.59□□□□□ -0.07
NR1H2P55055 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H2P55055 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H2P55055 AL135744.1-201ENST00000565098 629 ntBASIC14.59□□□□□ -0.07
NR1H2P55055 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H2P55055 AC015911.4-201ENST00000588022 1070 ntBASIC14.59□□□□□ -0.07
NR1H2P55055 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 AL009183.1-201ENST00000603760 355 ntBASIC14.59□□□□□ -0.07
NR1H2P55055 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NR1H2P55055 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H2P55055 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
NR1H2P55055 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H2P55055 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.58□□□□□ -0.07
NR1H2P55055 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H2P55055 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H2P55055 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.58□□□□□ -0.07
NR1H2P55055 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H2P55055 MST1P2-201ENST00000457982 2291 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H2P55055 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
NR1H2P55055 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.58□□□□□ -0.08
NR1H2P55055 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NR1H2P55055 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NR1H2P55055 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 KRT18P32-201ENST00000424695 1287 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 CNN2P2-201ENST00000443536 909 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 CNN2P3-201ENST00000450201 906 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 AC079140.1-201ENST00000508039 487 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 IGHV3-62-201ENST00000520057 340 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 AC087641.1-201ENST00000557561 1021 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.58□□□□□ -0.08
NR1H2P55055 MIR3909-201ENST00000579518 119 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 AL136317.3-201ENST00000618497 906 ntBASIC14.58□□□□□ -0.08
NR1H2P55055 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NR1H2P55055 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.58□□□□□ -0.08
NR1H2P55055 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR1H2P55055 AC113367.3-201ENST00000508316 1912 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms