Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.86■□□□□ 0.13
EPHB3P54753 CHMP1AP1-201ENST00000445563 662 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 HIST2H2BB-201ENST00000449108 381 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHB3P54753 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.86■□□□□ 0.13
EPHB3P54753 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.86■□□□□ 0.13
EPHB3P54753 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.86■□□□□ 0.13
EPHB3P54753 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.86■□□□□ 0.13
EPHB3P54753 AC007663.3-201ENST00000609632 465 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 AP001002.3-201ENST00000623482 206 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHB3P54753 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHB3P54753 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHB3P54753 REXO1L4P-201ENST00000605109 1937 ntBASIC15.86■□□□□ 0.13
EPHB3P54753 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHB3P54753 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHB3P54753 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHB3P54753 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
EPHB3P54753 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHB3P54753 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 AL137783.1-201ENST00000623494 1896 ntBASIC15.85■□□□□ 0.13
EPHB3P54753 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
EPHB3P54753 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.85■□□□□ 0.13
EPHB3P54753 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHB3P54753 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.85■□□□□ 0.13
EPHB3P54753 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHB3P54753 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.85■□□□□ 0.13
EPHB3P54753 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHB3P54753 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.85■□□□□ 0.13
EPHB3P54753 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHB3P54753 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHB3P54753 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHB3P54753 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 AC018735.1-201ENST00000437208 1502 ntBASIC15.84■□□□□ 0.13
EPHB3P54753 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 AC004945.1-201ENST00000416738 983 ntBASIC15.84■□□□□ 0.13
EPHB3P54753 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.84■□□□□ 0.13
EPHB3P54753 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.84■□□□□ 0.13
EPHB3P54753 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.84■□□□□ 0.13
EPHB3P54753 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.84■□□□□ 0.13
EPHB3P54753 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 AC068587.10-201ENST00000641210 219 ntBASIC15.84■□□□□ 0.13
EPHB3P54753 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.84■□□□□ 0.13
EPHB3P54753 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHB3P54753 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 AC020658.6-201ENST00000623564 1870 ntBASIC15.84■□□□□ 0.13
EPHB3P54753 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
EPHB3P54753 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHB3P54753 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHB3P54753 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.83■□□□□ 0.13
EPHB3P54753 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms