Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 SAMD11P1-201ENST00000571429 661 ntBASIC16.21■□□□□ 0.19
CACNA2D1P54289 AL022328.1-201ENST00000610050 478 ntBASIC16.21■□□□□ 0.19
CACNA2D1P54289 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 AP005019.2-201ENST00000615104 511 ntBASIC16.21■□□□□ 0.19
CACNA2D1P54289 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNA2D1P54289 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNA2D1P54289 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNA2D1P54289 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNA2D1P54289 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 PPT1-215ENST00000641471 2368 ntBASIC16.21■□□□□ 0.19
CACNA2D1P54289 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CACNA2D1P54289 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CACNA2D1P54289 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.21■□□□□ 0.18
CACNA2D1P54289 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CACNA2D1P54289 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CACNA2D1P54289 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CACNA2D1P54289 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 KLF2P2-201ENST00000416807 1039 ntBASIC16.2■□□□□ 0.18
CACNA2D1P54289 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 AC234783.1-201ENST00000441761 496 ntBASIC16.2■□□□□ 0.18
CACNA2D1P54289 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CACNA2D1P54289 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CACNA2D1P54289 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.19■□□□□ 0.18
CACNA2D1P54289 AC104457.1-201ENST00000401024 814 ntBASIC16.19■□□□□ 0.18
CACNA2D1P54289 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AL355864.2-201ENST00000447420 863 ntBASIC16.19■□□□□ 0.18
CACNA2D1P54289 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AL645728.2-202ENST00000641679 227 ntBASIC16.19■□□□□ 0.18
CACNA2D1P54289 PRSS30P-206ENST00000641773 873 ntBASIC16.19■□□□□ 0.18
CACNA2D1P54289 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CACNA2D1P54289 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.19■□□□□ 0.18
CACNA2D1P54289 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms