Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PDX1P52945 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.84□□□□□ -0.03
PDX1P52945 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDX1P52945 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.83□□□□□ -0.03
PDX1P52945 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.83□□□□□ -0.03
PDX1P52945 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDX1P52945 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 AC104640.1-201ENST00000562617 2109 ntBASIC14.83□□□□□ -0.04
PDX1P52945 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 AC126177.1-201ENST00000547829 2218 ntBASIC14.83□□□□□ -0.04
PDX1P52945 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 RNU1-114P-201ENST00000365297 166 ntBASIC14.83□□□□□ -0.04
PDX1P52945 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.83□□□□□ -0.04
PDX1P52945 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDX1P52945 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.83□□□□□ -0.04
PDX1P52945 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.83□□□□□ -0.04
PDX1P52945 AL591846.1-201ENST00000451736 433 ntBASIC14.83□□□□□ -0.04
PDX1P52945 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.83□□□□□ -0.04
PDX1P52945 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.83□□□□□ -0.04
PDX1P52945 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDX1P52945 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.83□□□□□ -0.04
PDX1P52945 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PDX1P52945 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.83□□□□□ -0.04
PDX1P52945 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.83□□□□□ -0.04
PDX1P52945 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 AHCYP2-201ENST00000430630 1300 ntBASIC14.83□□□□□ -0.04
PDX1P52945 AC136621.1-201ENST00000624017 2304 ntBASIC14.83□□□□□ -0.04
PDX1P52945 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDX1P52945 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.83□□□□□ -0.04
PDX1P52945 PPT1-215ENST00000641471 2368 ntBASIC14.83□□□□□ -0.04
PDX1P52945 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 AC092127.1-201ENST00000567093 3455 ntBASIC14.83□□□□□ -0.04
PDX1P52945 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.83□□□□□ -0.04
PDX1P52945 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDX1P52945 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.83□□□□□ -0.04
PDX1P52945 AC013268.4-201ENST00000637413 2228 ntBASIC14.82□□□□□ -0.04
PDX1P52945 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 AC020658.6-201ENST00000623564 1870 ntBASIC14.82□□□□□ -0.04
PDX1P52945 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.82□□□□□ -0.04
PDX1P52945 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.82□□□□□ -0.04
PDX1P52945 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PDX1P52945 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDX1P52945 ACTBP8-201ENST00000403258 1108 ntBASIC14.82□□□□□ -0.04
PDX1P52945 AC004945.1-201ENST00000416738 983 ntBASIC14.82□□□□□ -0.04
PDX1P52945 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.82□□□□□ -0.04
PDX1P52945 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.82□□□□□ -0.04
PDX1P52945 AC104306.2-201ENST00000451877 341 ntBASIC14.82□□□□□ -0.04
PDX1P52945 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.82□□□□□ -0.04
PDX1P52945 RNA5SP486-201ENST00000515961 83 ntBASIC14.82□□□□□ -0.04
PDX1P52945 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.82□□□□□ -0.04
PDX1P52945 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.82□□□□□ -0.04
PDX1P52945 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms