Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.2□□□□□ -0.3
HCFC1P51610 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.2□□□□□ -0.3
HCFC1P51610 U62317.3-201ENST00000608319 855 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 AC100757.4-201ENST00000626934 759 ntBASIC13.2□□□□□ -0.3
HCFC1P51610 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HCFC1P51610 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.2□□□□□ -0.3
HCFC1P51610 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
HCFC1P51610 AC009090.5-201ENST00000624886 2285 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
HCFC1P51610 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 RPL17P11-201ENST00000417593 544 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 MPRIPP1-201ENST00000452433 1089 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.19□□□□□ -0.3
HCFC1P51610 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 AC116345.2-201ENST00000512837 523 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 AC103988.2-201ENST00000561804 725 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.19□□□□□ -0.3
HCFC1P51610 CU633904.3-201ENST00000624042 1029 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 AP005117.1-202ENST00000581724 1908 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.19□□□□□ -0.3
HCFC1P51610 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.19□□□□□ -0.3
HCFC1P51610 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.19□□□□□ -0.3
HCFC1P51610 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.19□□□□□ -0.3
HCFC1P51610 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HCFC1P51610 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.18□□□□□ -0.3
HCFC1P51610 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.18□□□□□ -0.3
HCFC1P51610 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.18□□□□□ -0.3
HCFC1P51610 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.18□□□□□ -0.3
HCFC1P51610 YRDCP1-201ENST00000621419 643 ntBASIC13.18□□□□□ -0.3
HCFC1P51610 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.18□□□□□ -0.3
HCFC1P51610 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HCFC1P51610 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HCFC1P51610 AC073347.1-201ENST00000421633 2643 ntBASIC13.18□□□□□ -0.3
HCFC1P51610 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HCFC1P51610 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.18□□□□□ -0.3
HCFC1P51610 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms