Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RNF144AP50876 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RNF144AP50876 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF144AP50876 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 AC126365.1-201ENST00000578585 1514 ntBASIC14.29□□□□□ -0.12
RNF144AP50876 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF144AP50876 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RNF144AP50876 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF144AP50876 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF144AP50876 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF144AP50876 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF144AP50876 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RNF144AP50876 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF144AP50876 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 REXO1L2P-201ENST00000425429 2069 ntBASIC14.28□□□□□ -0.12
RNF144AP50876 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 AL122018.1-201ENST00000446607 2310 ntBASIC14.28□□□□□ -0.12
RNF144AP50876 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 KRT18P43-201ENST00000469825 1281 ntBASIC14.28□□□□□ -0.12
RNF144AP50876 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF144AP50876 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF144AP50876 ADAM3B-201ENST00000569937 840 ntBASIC14.28□□□□□ -0.12
RNF144AP50876 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF144AP50876 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF144AP50876 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RNF144AP50876 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.28□□□□□ -0.12
RNF144AP50876 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF144AP50876 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF144AP50876 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF144AP50876 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.28□□□□□ -0.12
RNF144AP50876 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF144AP50876 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF144AP50876 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF144AP50876 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF144AP50876 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF144AP50876 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 INTS4P1-203ENST00000641008 3683 ntBASIC14.27□□□□□ -0.12
RNF144AP50876 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RNF144AP50876 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 AC023908.3-201ENST00000564211 3047 ntBASIC14.27□□□□□ -0.12
RNF144AP50876 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF144AP50876 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RNF144AP50876 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF144AP50876 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF144AP50876 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF144AP50876 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF144AP50876 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF144AP50876 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF144AP50876 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RNF144AP50876 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF144AP50876 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF144AP50876 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms