Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC6A9P48067 SPCS2P1-201ENST00000561636 679 ntBASIC13.6□□□□□ -0.23
SLC6A9P48067 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC6A9P48067 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.6□□□□□ -0.23
SLC6A9P48067 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.6□□□□□ -0.23
SLC6A9P48067 AL390955.2-201ENST00000603032 514 ntBASIC13.6□□□□□ -0.23
SLC6A9P48067 AL096865.1-201ENST00000606796 927 ntBASIC13.6□□□□□ -0.23
SLC6A9P48067 AC074044.1-201ENST00000609673 707 ntBASIC13.6□□□□□ -0.23
SLC6A9P48067 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC6A9P48067 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC6A9P48067 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 AL109936.8-201ENST00000641772 604 ntBASIC13.6□□□□□ -0.23
SLC6A9P48067 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC6A9P48067 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC6A9P48067 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.6□□□□□ -0.23
SLC6A9P48067 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC6A9P48067 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC6A9P48067 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SLC6A9P48067 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC6A9P48067 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 PEG13-201ENST00000631594 5667 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC6A9P48067 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AGAP7P-201ENST00000582299 2062 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 AGAP14-201ENST00000624701 2060 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC6A9P48067 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AC074338.1-201ENST00000416825 156 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 AC015922.1-201ENST00000421102 1152 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 TREML5P-201ENST00000421694 576 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC6A9P48067 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC6A9P48067 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AC010336.2-201ENST00000564226 506 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC6A9P48067 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC6A9P48067 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.59□□□□□ -0.23
SLC6A9P48067 AL158211.3-201ENST00000607385 239 ntBASIC13.59□□□□□ -0.23
SLC6A9P48067 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC6A9P48067 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SLC6A9P48067 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC6A9P48067 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC6A9P48067 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.58□□□□□ -0.23
SLC6A9P48067 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC6A9P48067 AL359258.3-201ENST00000622910 2331 ntBASIC13.58□□□□□ -0.23
SLC6A9P48067 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SLC6A9P48067 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC6A9P48067 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC6A9P48067 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC6A9P48067 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC6A9P48067 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC6A9P48067 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC6A9P48067 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.58□□□□□ -0.24
SLC6A9P48067 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC6A9P48067 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC6A9P48067 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms