Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
APOBEC1P41238 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
APOBEC1P41238 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
APOBEC1P41238 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 AL139094.1-201ENST00000405549 1188 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 AP006294.1-201ENST00000415407 339 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
APOBEC1P41238 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.81□□□□□ -0.2
APOBEC1P41238 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
APOBEC1P41238 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
APOBEC1P41238 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 WASH4P-201ENST00000564273 1246 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 AC009486.1-201ENST00000569860 813 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 AL603764.1-201ENST00000636452 321 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 AL358472.5-202ENST00000641448 1267 ntBASIC13.81□□□□□ -0.2
APOBEC1P41238 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
APOBEC1P41238 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
APOBEC1P41238 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
APOBEC1P41238 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOBEC1P41238 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AC099063.4-201ENST00000641099 1602 ntBASIC13.8□□□□□ -0.2
APOBEC1P41238 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
APOBEC1P41238 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.8□□□□□ -0.2
APOBEC1P41238 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AC011495.1-201ENST00000498085 584 ntBASIC13.8□□□□□ -0.2
APOBEC1P41238 KRT18P25-201ENST00000508931 1278 ntBASIC13.8□□□□□ -0.2
APOBEC1P41238 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
APOBEC1P41238 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
APOBEC1P41238 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.8□□□□□ -0.2
APOBEC1P41238 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms