Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.53□□□□□ -0.08
RORAP35398 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 FAM197Y7-201ENST00000432892 766 ntBASIC14.53□□□□□ -0.08
RORAP35398 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.53□□□□□ -0.08
RORAP35398 YBX1P6-201ENST00000442962 1002 ntBASIC14.53□□□□□ -0.08
RORAP35398 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.53□□□□□ -0.08
RORAP35398 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.53□□□□□ -0.08
RORAP35398 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.53□□□□□ -0.08
RORAP35398 DUX4L45-201ENST00000566406 1057 ntBASIC14.53□□□□□ -0.08
RORAP35398 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.53□□□□□ -0.08
RORAP35398 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.53□□□□□ -0.08
RORAP35398 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 AC132938.4-201ENST00000623835 848 ntBASIC14.53□□□□□ -0.08
RORAP35398 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.53□□□□□ -0.08
RORAP35398 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RORAP35398 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RORAP35398 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.53□□□□□ -0.08
RORAP35398 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RORAP35398 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.52□□□□□ -0.08
RORAP35398 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RORAP35398 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RORAP35398 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.52□□□□□ -0.08
RORAP35398 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.52□□□□□ -0.08
RORAP35398 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RORAP35398 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RORAP35398 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RORAP35398 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.52□□□□□ -0.08
RORAP35398 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RORAP35398 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 AL645937.2-201ENST00000396808 931 ntBASIC14.52□□□□□ -0.09
RORAP35398 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.52□□□□□ -0.09
RORAP35398 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.52□□□□□ -0.09
RORAP35398 AC022494.1-201ENST00000466044 728 ntBASIC14.52□□□□□ -0.09
RORAP35398 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.52□□□□□ -0.09
RORAP35398 AC078819.1-201ENST00000547454 765 ntBASIC14.52□□□□□ -0.09
RORAP35398 AC012085.1-201ENST00000548270 765 ntBASIC14.52□□□□□ -0.09
RORAP35398 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.52□□□□□ -0.09
RORAP35398 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.52□□□□□ -0.09
RORAP35398 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.52□□□□□ -0.09
RORAP35398 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 AC090616.6-203ENST00000579186 1945 ntBASIC14.52□□□□□ -0.09
RORAP35398 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 AC148477.4-201ENST00000613430 1793 ntBASIC14.52□□□□□ -0.09
RORAP35398 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.52□□□□□ -0.09
RORAP35398 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.52□□□□□ -0.09
RORAP35398 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RORAP35398 AC007787.1-201ENST00000588095 1583 ntBASIC14.51□□□□□ -0.09
RORAP35398 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RORAP35398 AC132872.4-202ENST00000622924 2756 ntBASIC14.51□□□□□ -0.09
RORAP35398 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RORAP35398 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RORAP35398 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
RORAP35398 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.51□□□□□ -0.09
RORAP35398 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RORAP35398 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.51□□□□□ -0.09
RORAP35398 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RORAP35398 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
RORAP35398 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms