Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC8P31273 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC8P31273 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC8P31273 CYP4F23P-201ENST00000593402 1579 ntBASIC16.36■□□□□ 0.21
HOXC8P31273 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC8P31273 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
HOXC8P31273 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HOXC8P31273 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC8P31273 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 AL035414.1-201ENST00000451327 857 ntBASIC16.36■□□□□ 0.21
HOXC8P31273 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.36■□□□□ 0.21
HOXC8P31273 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC8P31273 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.36■□□□□ 0.21
HOXC8P31273 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.36■□□□□ 0.21
HOXC8P31273 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC8P31273 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HOXC8P31273 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC8P31273 AC136621.1-201ENST00000624017 2304 ntBASIC16.36■□□□□ 0.21
HOXC8P31273 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.36■□□□□ 0.21
HOXC8P31273 AC144522.1-201ENST00000625111 1658 ntBASIC16.36■□□□□ 0.21
HOXC8P31273 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.36■□□□□ 0.21
HOXC8P31273 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HOXC8P31273 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HOXC8P31273 AC239868.1-201ENST00000369385 493 ntBASIC16.35■□□□□ 0.21
HOXC8P31273 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 MPRIPP1-201ENST00000452433 1089 ntBASIC16.35■□□□□ 0.21
HOXC8P31273 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC8P31273 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.35■□□□□ 0.21
HOXC8P31273 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 MEG3_2.1-201ENST00000611456 105 ntBASIC16.35■□□□□ 0.21
HOXC8P31273 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 AL157813.1-201ENST00000612996 587 ntBASIC16.35■□□□□ 0.21
HOXC8P31273 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.35■□□□□ 0.21
HOXC8P31273 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.35■□□□□ 0.21
HOXC8P31273 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HOXC8P31273 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC8P31273 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms