Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TM4SF1P30408 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TM4SF1P30408 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TM4SF1P30408 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.6■□□□□ 0.57
TM4SF1P30408 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF1P30408 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TM4SF1P30408 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF1P30408 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF1P30408 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF1P30408 AC079112.1-201ENST00000454972 939 ntBASIC18.59■□□□□ 0.57
TM4SF1P30408 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.59■□□□□ 0.57
TM4SF1P30408 MIR3188-201ENST00000583494 85 ntBASIC18.59■□□□□ 0.57
TM4SF1P30408 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.59■□□□□ 0.57
TM4SF1P30408 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF1P30408 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TM4SF1P30408 AC025262.2-201ENST00000623975 1056 ntBASIC18.59■□□□□ 0.57
TM4SF1P30408 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.59■□□□□ 0.57
TM4SF1P30408 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF1P30408 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TM4SF1P30408 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TM4SF1P30408 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.59■□□□□ 0.57
TM4SF1P30408 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.58■□□□□ 0.57
TM4SF1P30408 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.58■□□□□ 0.57
TM4SF1P30408 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.58■□□□□ 0.57
TM4SF1P30408 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TM4SF1P30408 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.58■□□□□ 0.57
TM4SF1P30408 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 AL583805.1-201ENST00000391389 531 ntBASIC18.58■□□□□ 0.56
TM4SF1P30408 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TM4SF1P30408 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TM4SF1P30408 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.58■□□□□ 0.56
TM4SF1P30408 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 TMCO5B-205ENST00000530020 894 ntBASIC18.58■□□□□ 0.56
TM4SF1P30408 RBM8B-201ENST00000555532 525 ntBASIC18.58■□□□□ 0.56
TM4SF1P30408 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TM4SF1P30408 AC133540.1-201ENST00000620845 1019 ntBASIC18.58■□□□□ 0.56
TM4SF1P30408 AL132780.4-201ENST00000624870 1135 ntBASIC18.58■□□□□ 0.56
TM4SF1P30408 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
TM4SF1P30408 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TM4SF1P30408 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.58■□□□□ 0.56
TM4SF1P30408 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.58■□□□□ 0.56
TM4SF1P30408 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TM4SF1P30408 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TM4SF1P30408 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.57■□□□□ 0.56
TM4SF1P30408 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 AC099398.1-201ENST00000567919 2776 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 AC234644.1-201ENST00000406065 370 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.57■□□□□ 0.56
TM4SF1P30408 RPSAP15-201ENST00000448168 861 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 CHCHD2P9-201ENST00000461726 456 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TM4SF1P30408 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.57■□□□□ 0.56
TM4SF1P30408 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.57■□□□□ 0.56
TM4SF1P30408 AC005357.2-202ENST00000590507 1060 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 AC084781.1-201ENST00000613737 656 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TM4SF1P30408 AC092850.2-201ENST00000623821 2697 ntBASIC18.57■□□□□ 0.56
TM4SF1P30408 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.57■□□□□ 0.56
TM4SF1P30408 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms