Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RXRBP28702 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RXRBP28702 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRBP28702 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRBP28702 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RXRBP28702 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.42■□□□□ 0.7
RXRBP28702 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.42■□□□□ 0.7
RXRBP28702 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.42■□□□□ 0.7
RXRBP28702 AC023968.2-201ENST00000560593 1049 ntBASIC19.42■□□□□ 0.7
RXRBP28702 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC19.42■□□□□ 0.7
RXRBP28702 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC19.42■□□□□ 0.7
RXRBP28702 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRBP28702 AC009145.4-201ENST00000625119 1294 ntBASIC19.42■□□□□ 0.7
RXRBP28702 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.42■□□□□ 0.7
RXRBP28702 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 AC078925.2-201ENST00000624013 1973 ntBASIC19.42■□□□□ 0.7
RXRBP28702 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.42■□□□□ 0.7
RXRBP28702 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RXRBP28702 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RXRBP28702 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RXRBP28702 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
RXRBP28702 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RXRBP28702 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RXRBP28702 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RXRBP28702 AC008536.3-201ENST00000623282 1599 ntBASIC19.41■□□□□ 0.7
RXRBP28702 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RXRBP28702 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.41■□□□□ 0.7
RXRBP28702 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RXRBP28702 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 RPS18P9-201ENST00000482817 460 ntBASIC19.41■□□□□ 0.7
RXRBP28702 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 KRT8P1-201ENST00000557533 1207 ntBASIC19.41■□□□□ 0.7
RXRBP28702 SIGLEC22P-201ENST00000599104 714 ntBASIC19.41■□□□□ 0.7
RXRBP28702 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 AL008638.4-201ENST00000624792 1315 ntBASIC19.41■□□□□ 0.7
RXRBP28702 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.41■□□□□ 0.7
RXRBP28702 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RXRBP28702 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 PYY2-201ENST00000315776 282 ntBASIC19.4■□□□□ 0.7
RXRBP28702 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 SNORA57-201ENST00000383870 149 ntBASIC19.4■□□□□ 0.7
RXRBP28702 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.4■□□□□ 0.7
RXRBP28702 AL356000.1-201ENST00000441073 1238 ntBASIC19.4■□□□□ 0.7
RXRBP28702 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 AC113347.2-201ENST00000512350 279 ntBASIC19.4■□□□□ 0.7
RXRBP28702 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 AC131206.1-201ENST00000538078 1211 ntBASIC19.4■□□□□ 0.7
RXRBP28702 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC19.4■□□□□ 0.7
RXRBP28702 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 WASH3P-207ENST00000560956 1394 ntBASIC19.4■□□□□ 0.7
RXRBP28702 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.4■□□□□ 0.7
RXRBP28702 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RXRBP28702 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC19.4■□□□□ 0.7
RXRBP28702 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RXRBP28702 AC106886.4-201ENST00000623557 2502 ntBASIC19.4■□□□□ 0.7
RXRBP28702 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19.39■□□□□ 0.7
RXRBP28702 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms