Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 AC134312.5-201ENST00000568031 1313 ntBASIC14.09□□□□□ -0.15
ABCD3P28288 AL360270.3-201ENST00000609118 1348 ntBASIC14.09□□□□□ -0.15
ABCD3P28288 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 AL157414.3-201ENST00000624276 1954 ntBASIC14.09□□□□□ -0.15
ABCD3P28288 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.09□□□□□ -0.15
ABCD3P28288 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ABCD3P28288 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ABCD3P28288 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ABCD3P28288 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ABCD3P28288 REXO1L5P-201ENST00000622260 2098 ntBASIC14.08□□□□□ -0.15
ABCD3P28288 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ABCD3P28288 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.08□□□□□ -0.16
ABCD3P28288 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 USP32P1-208ENST00000506594 1164 ntBASIC14.08□□□□□ -0.16
ABCD3P28288 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.08□□□□□ -0.16
ABCD3P28288 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
ABCD3P28288 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.08□□□□□ -0.16
ABCD3P28288 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 KRT8P35-201ENST00000483942 1338 ntBASIC14.08□□□□□ -0.16
ABCD3P28288 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.08□□□□□ -0.16
ABCD3P28288 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ABCD3P28288 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
ABCD3P28288 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 KRT8P14-201ENST00000414254 1442 ntBASIC14.07□□□□□ -0.16
ABCD3P28288 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ABCD3P28288 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ABCD3P28288 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ABCD3P28288 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ABCD3P28288 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
ABCD3P28288 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.07□□□□□ -0.16
ABCD3P28288 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.07□□□□□ -0.16
ABCD3P28288 SLC25A47P1-201ENST00000531577 414 ntBASIC14.07□□□□□ -0.16
ABCD3P28288 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ABCD3P28288 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 569.7 ms