Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC010327.5-201ENST00000586923 3061 ntBASIC15.13■□□□□ 0.01
VARSP26640 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.13■□□□□ 0.01
VARSP26640 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 AC074044.1-201ENST00000609673 707 ntBASIC15.13■□□□□ 0.01
VARSP26640 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.13■□□□□ 0.01
VARSP26640 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VARSP26640 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VARSP26640 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.12■□□□□ 0.01
VARSP26640 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.12■□□□□ 0.01
VARSP26640 RPL13P2-201ENST00000440687 659 ntBASIC15.12■□□□□ 0.01
VARSP26640 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 SDHAP3-202ENST00000515467 728 ntBASIC15.12■□□□□ 0.01
VARSP26640 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.12■□□□□ 0.01
VARSP26640 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.12■□□□□ 0.01
VARSP26640 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.12■□□□□ 0.01
VARSP26640 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.12■□□□□ 0.01
VARSP26640 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.12■□□□□ 0.01
VARSP26640 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.12■□□□□ 0.01
VARSP26640 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARSP26640 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 AC148477.4-201ENST00000613430 1793 ntBASIC15.11■□□□□ 0.01
VARSP26640 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 LINC00552-201ENST00000625151 2579 ntBASIC15.11■□□□□ 0.01
VARSP26640 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VARSP26640 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
VARSP26640 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
VARSP26640 SSR1P1-201ENST00000407630 814 ntBASIC15.11■□□□□ 0.01
VARSP26640 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.11■□□□□ 0.01
VARSP26640 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.11■□□□□ 0.01
VARSP26640 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.11■□□□□ 0.01
VARSP26640 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARSP26640 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.11■□□□□ 0.01
VARSP26640 SPTLC1P1-201ENST00000447199 261 ntBASIC15.11■□□□□ 0.01
VARSP26640 AC009477.1-201ENST00000452936 217 ntBASIC15.11■□□□□ 0.01
VARSP26640 HNRNPA1P23-201ENST00000491091 1133 ntBASIC15.11■□□□□ 0.01
VARSP26640 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARSP26640 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC15.11■□□□□ 0.01
VARSP26640 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.11■□□□□ 0.01
VARSP26640 AC009407.1-201ENST00000568958 598 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms