Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.12□□□□□ -0.31
TNFSF4P23510 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TNFSF4P23510 AL138799.1-201ENST00000448213 1675 ntBASIC13.12□□□□□ -0.31
TNFSF4P23510 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 AC132872.4-202ENST00000622924 2756 ntBASIC13.11□□□□□ -0.31
TNFSF4P23510 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TNFSF4P23510 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.11□□□□□ -0.31
TNFSF4P23510 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TNFSF4P23510 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 AL512384.1-201ENST00000406683 331 ntBASIC13.11□□□□□ -0.31
TNFSF4P23510 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
TNFSF4P23510 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.11□□□□□ -0.31
TNFSF4P23510 AC007389.4-201ENST00000454674 793 ntBASIC13.11□□□□□ -0.31
TNFSF4P23510 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.11□□□□□ -0.31
TNFSF4P23510 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.11□□□□□ -0.31
TNFSF4P23510 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.11□□□□□ -0.31
TNFSF4P23510 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 AC124283.3-201ENST00000570869 594 ntBASIC13.11□□□□□ -0.31
TNFSF4P23510 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.11□□□□□ -0.31
TNFSF4P23510 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.11□□□□□ -0.31
TNFSF4P23510 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.11□□□□□ -0.31
TNFSF4P23510 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.11□□□□□ -0.31
TNFSF4P23510 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 MIR193BHG-211ENST00000641433 5365 ntBASIC13.11□□□□□ -0.31
TNFSF4P23510 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.11□□□□□ -0.31
TNFSF4P23510 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TNFSF4P23510 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
TNFSF4P23510 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TNFSF4P23510 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TNFSF4P23510 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.1□□□□□ -0.31
TNFSF4P23510 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TNFSF4P23510 AL645937.2-201ENST00000396808 931 ntBASIC13.1□□□□□ -0.31
TNFSF4P23510 NME2P1-201ENST00000426182 414 ntBASIC13.1□□□□□ -0.31
TNFSF4P23510 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms