Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.46□□□□□ -0.25
ATF1P18846 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 MTND6P24-201ENST00000440466 518 ntBASIC13.46□□□□□ -0.25
ATF1P18846 TARDBPP1-201ENST00000442013 1203 ntBASIC13.46□□□□□ -0.25
ATF1P18846 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 YBX1P5-201ENST00000509441 847 ntBASIC13.46□□□□□ -0.25
ATF1P18846 AC026150.2-201ENST00000564693 1156 ntBASIC13.46□□□□□ -0.25
ATF1P18846 MIR4469-201ENST00000583919 79 ntBASIC13.46□□□□□ -0.25
ATF1P18846 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 AC007967.4-201ENST00000614700 386 ntBASIC13.46□□□□□ -0.25
ATF1P18846 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.46□□□□□ -0.25
ATF1P18846 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.46□□□□□ -0.25
ATF1P18846 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
ATF1P18846 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ATF1P18846 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
ATF1P18846 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 AC015802.1-201ENST00000588104 1449 ntBASIC13.46□□□□□ -0.26
ATF1P18846 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
ATF1P18846 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ATF1P18846 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
ATF1P18846 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ATF1P18846 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.45□□□□□ -0.26
ATF1P18846 GPS2P2-201ENST00000430745 888 ntBASIC13.45□□□□□ -0.26
ATF1P18846 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 SPDYE14P-201ENST00000442619 822 ntBASIC13.45□□□□□ -0.26
ATF1P18846 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.45□□□□□ -0.26
ATF1P18846 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.45□□□□□ -0.26
ATF1P18846 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.45□□□□□ -0.26
ATF1P18846 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.45□□□□□ -0.26
ATF1P18846 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.45□□□□□ -0.26
ATF1P18846 AL671883.3-201ENST00000603274 991 ntBASIC13.45□□□□□ -0.26
ATF1P18846 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ATF1P18846 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms