Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 DUTP3-201ENST00000450025 415 ntBASIC15.38■□□□□ 0.05
VCANP13611 AC092896.1-201ENST00000465850 380 ntBASIC15.38■□□□□ 0.05
VCANP13611 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC15.38■□□□□ 0.05
VCANP13611 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 AC010491.1-201ENST00000563101 2797 ntBASIC15.38■□□□□ 0.05
VCANP13611 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
VCANP13611 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.38■□□□□ 0.05
VCANP13611 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.38■□□□□ 0.05
VCANP13611 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC15.38■□□□□ 0.05
VCANP13611 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.38■□□□□ 0.05
VCANP13611 NEK4P3-201ENST00000604859 544 ntBASIC15.38■□□□□ 0.05
VCANP13611 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.38■□□□□ 0.05
VCANP13611 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.38■□□□□ 0.05
VCANP13611 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 AP001282.1-201ENST00000531301 1499 ntBASIC15.38■□□□□ 0.05
VCANP13611 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.38■□□□□ 0.05
VCANP13611 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
VCANP13611 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.38■□□□□ 0.05
VCANP13611 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VCANP13611 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
VCANP13611 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
VCANP13611 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.38■□□□□ 0.05
VCANP13611 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VCANP13611 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.37■□□□□ 0.05
VCANP13611 AC012441.2-201ENST00000444843 739 ntBASIC15.37■□□□□ 0.05
VCANP13611 AL451000.1-201ENST00000451300 1186 ntBASIC15.37■□□□□ 0.05
VCANP13611 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.37■□□□□ 0.05
VCANP13611 BPIFB5P-201ENST00000457066 1099 ntBASIC15.37■□□□□ 0.05
VCANP13611 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.37■□□□□ 0.05
VCANP13611 AC022121.1-201ENST00000484584 579 ntBASIC15.37■□□□□ 0.05
VCANP13611 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC15.37■□□□□ 0.05
VCANP13611 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 PCDHA14-201ENST00000506751 2298 ntBASIC15.37■□□□□ 0.05
VCANP13611 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.37■□□□□ 0.05
VCANP13611 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.37■□□□□ 0.05
VCANP13611 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.37■□□□□ 0.05
VCANP13611 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
VCANP13611 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
VCANP13611 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 RN7SKP109-201ENST00000410592 316 ntBASIC15.37■□□□□ 0.05
VCANP13611 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.37■□□□□ 0.05
VCANP13611 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.37■□□□□ 0.05
VCANP13611 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.37■□□□□ 0.05
VCANP13611 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VCANP13611 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VCANP13611 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
VCANP13611 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
VCANP13611 AL645937.2-201ENST00000396808 931 ntBASIC15.36■□□□□ 0.05
VCANP13611 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.36■□□□□ 0.05
VCANP13611 RPSAP15-201ENST00000448168 861 ntBASIC15.36■□□□□ 0.05
VCANP13611 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC15.36■□□□□ 0.05
VCANP13611 AC005962.1-201ENST00000584100 773 ntBASIC15.36■□□□□ 0.05
VCANP13611 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.36■□□□□ 0.05
VCANP13611 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.36■□□□□ 0.05
VCANP13611 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.36■□□□□ 0.05
VCANP13611 AC002044.2-201ENST00000624910 970 ntBASIC15.36■□□□□ 0.05
VCANP13611 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.36■□□□□ 0.05
VCANP13611 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
VCANP13611 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VCANP13611 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.36■□□□□ 0.05
VCANP13611 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.36■□□□□ 0.05
VCANP13611 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC15.36■□□□□ 0.05
VCANP13611 AP000769.1-203ENST00000637245 208 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms