Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.82■□□□□ 0.12
CD48P09326 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.82■□□□□ 0.12
CD48P09326 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.82■□□□□ 0.12
CD48P09326 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.82■□□□□ 0.12
CD48P09326 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.82■□□□□ 0.12
CD48P09326 AC123567.1-201ENST00000548294 1261 ntBASIC15.82■□□□□ 0.12
CD48P09326 SPCS2P1-201ENST00000561636 679 ntBASIC15.82■□□□□ 0.12
CD48P09326 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CD48P09326 AC120045.2-201ENST00000567334 178 ntBASIC15.82■□□□□ 0.12
CD48P09326 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.82■□□□□ 0.12
CD48P09326 RN7SL204P-201ENST00000582831 262 ntBASIC15.82■□□□□ 0.12
CD48P09326 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.82■□□□□ 0.12
CD48P09326 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.82■□□□□ 0.12
CD48P09326 LINC02560-201ENST00000596379 459 ntBASIC15.82■□□□□ 0.12
CD48P09326 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
CD48P09326 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CD48P09326 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 AC018442.1-201ENST00000421439 2061 ntBASIC15.82■□□□□ 0.12
CD48P09326 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.82■□□□□ 0.12
CD48P09326 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CD48P09326 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 AC068587.6-202ENST00000641839 5619 ntBASIC15.81■□□□□ 0.12
CD48P09326 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 AC236430.1-201ENST00000402231 743 ntBASIC15.81■□□□□ 0.12
CD48P09326 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.81■□□□□ 0.12
CD48P09326 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.81■□□□□ 0.12
CD48P09326 AL359711.2-201ENST00000563105 872 ntBASIC15.81■□□□□ 0.12
CD48P09326 AC124283.3-201ENST00000570869 594 ntBASIC15.81■□□□□ 0.12
CD48P09326 SPDYE22P-201ENST00000582158 798 ntBASIC15.81■□□□□ 0.12
CD48P09326 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CD48P09326 AC093726.1-201ENST00000608064 963 ntBASIC15.81■□□□□ 0.12
CD48P09326 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CD48P09326 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.81■□□□□ 0.12
CD48P09326 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CD48P09326 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 AC007191.1-201ENST00000623179 2995 ntBASIC15.8■□□□□ 0.12
CD48P09326 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.8■□□□□ 0.12
CD48P09326 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD48P09326 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.8■□□□□ 0.12
CD48P09326 AC134915.1-201ENST00000426461 574 ntBASIC15.8■□□□□ 0.12
CD48P09326 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 DFFBP1-201ENST00000433250 979 ntBASIC15.8■□□□□ 0.12
CD48P09326 API5-211ENST00000534695 560 ntTSL 5 BASIC15.8■□□□□ 0.12
CD48P09326 AC092552.1-201ENST00000547243 906 ntBASIC15.8■□□□□ 0.12
CD48P09326 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
CD48P09326 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms