Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.2■□□□□ 0.34
TPM3P06753 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPM3P06753 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 GHSR-202ENST00000427970 912 ntBASIC17.19■□□□□ 0.34
TPM3P06753 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.19■□□□□ 0.34
TPM3P06753 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.19■□□□□ 0.34
TPM3P06753 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TPM3P06753 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 AC018529.2-202ENST00000611482 3087 ntBASIC17.19■□□□□ 0.34
TPM3P06753 CICP11-201ENST00000434745 2827 ntBASIC17.19■□□□□ 0.34
TPM3P06753 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM3P06753 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM3P06753 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 AC107918.4-201ENST00000641966 3141 ntBASIC17.18■□□□□ 0.34
TPM3P06753 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 AC145285.3-201ENST00000564603 959 ntBASIC17.18■□□□□ 0.34
TPM3P06753 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TPM3P06753 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 AC104109.2-201ENST00000602919 1418 ntBASIC17.18■□□□□ 0.34
TPM3P06753 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM3P06753 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM3P06753 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM3P06753 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM3P06753 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM3P06753 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.17■□□□□ 0.34
TPM3P06753 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TPM3P06753 KRT18P2-201ENST00000447938 1258 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms