Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AP000812.2-201ENST00000538934 718 ntBASIC18.27■□□□□ 0.52
CHGBP05060 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.27■□□□□ 0.52
CHGBP05060 AC017083.2-201ENST00000608069 979 ntBASIC18.27■□□□□ 0.52
CHGBP05060 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHGBP05060 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHGBP05060 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHGBP05060 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.27■□□□□ 0.51
CHGBP05060 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
CHGBP05060 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.51
CHGBP05060 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.27■□□□□ 0.51
CHGBP05060 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHGBP05060 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CHGBP05060 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CHGBP05060 AC023824.1-201ENST00000562945 2975 ntBASIC18.27■□□□□ 0.51
CHGBP05060 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.27■□□□□ 0.51
CHGBP05060 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 AC104989.1-201ENST00000519711 778 ntBASIC18.26■□□□□ 0.51
CHGBP05060 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 COX11-210ENST00000639671 696 ntBASIC18.26■□□□□ 0.51
CHGBP05060 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHGBP05060 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHGBP05060 AC018529.2-202ENST00000611482 3087 ntBASIC18.26■□□□□ 0.51
CHGBP05060 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHGBP05060 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.25■□□□□ 0.51
CHGBP05060 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 AC020910.5-201ENST00000623668 1865 ntBASIC18.25■□□□□ 0.51
CHGBP05060 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHGBP05060 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CHGBP05060 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CHGBP05060 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHGBP05060 AC007274.1-201ENST00000439805 662 ntBASIC18.25■□□□□ 0.51
CHGBP05060 KLF2P4-201ENST00000451959 1225 ntBASIC18.25■□□□□ 0.51
CHGBP05060 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.25■□□□□ 0.51
CHGBP05060 AL391280.1-201ENST00000506969 1062 ntBASIC18.25■□□□□ 0.51
CHGBP05060 AC022616.1-201ENST00000518688 554 ntBASIC18.25■□□□□ 0.51
CHGBP05060 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.25■□□□□ 0.51
CHGBP05060 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.25■□□□□ 0.51
CHGBP05060 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHGBP05060 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.25■□□□□ 0.51
CHGBP05060 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms