Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
OPN1SWP03999 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
OPN1SWP03999 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.33□□□□□ -0.11
OPN1SWP03999 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
OPN1SWP03999 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
OPN1SWP03999 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
OPN1SWP03999 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
OPN1SWP03999 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
OPN1SWP03999 BX640514.1-201ENST00000583223 1918 ntBASIC14.33□□□□□ -0.11
OPN1SWP03999 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.33□□□□□ -0.12
OPN1SWP03999 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.33□□□□□ -0.12
OPN1SWP03999 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
OPN1SWP03999 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 AL121723.1-201ENST00000445194 1519 ntBASIC14.33□□□□□ -0.12
OPN1SWP03999 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
OPN1SWP03999 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 RPSAP43-201ENST00000402237 625 ntBASIC14.33□□□□□ -0.12
OPN1SWP03999 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 AC015922.1-201ENST00000421102 1152 ntBASIC14.33□□□□□ -0.12
OPN1SWP03999 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.33□□□□□ -0.12
OPN1SWP03999 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.33□□□□□ -0.12
OPN1SWP03999 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.33□□□□□ -0.12
OPN1SWP03999 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.33□□□□□ -0.12
OPN1SWP03999 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 AP001059.3-201ENST00000619053 235 ntBASIC14.33□□□□□ -0.12
OPN1SWP03999 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.33□□□□□ -0.12
OPN1SWP03999 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.33□□□□□ -0.12
OPN1SWP03999 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.33□□□□□ -0.12
OPN1SWP03999 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
OPN1SWP03999 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
OPN1SWP03999 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
OPN1SWP03999 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.32□□□□□ -0.12
OPN1SWP03999 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 AC012508.2-201ENST00000567613 1472 ntBASIC14.32□□□□□ -0.12
OPN1SWP03999 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
OPN1SWP03999 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 AC067750.1-201ENST00000608826 6545 ntBASIC14.32□□□□□ -0.12
OPN1SWP03999 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 CICP4-201ENST00000447359 2812 ntBASIC14.32□□□□□ -0.12
OPN1SWP03999 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
OPN1SWP03999 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
OPN1SWP03999 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.32□□□□□ -0.12
OPN1SWP03999 BX842568.4-201ENST00000421222 227 ntBASIC14.32□□□□□ -0.12
OPN1SWP03999 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.32□□□□□ -0.12
OPN1SWP03999 RPL13P2-201ENST00000440687 659 ntBASIC14.32□□□□□ -0.12
OPN1SWP03999 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.32□□□□□ -0.12
OPN1SWP03999 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.32□□□□□ -0.12
OPN1SWP03999 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 AL512361.1-201ENST00000554200 418 ntBASIC14.32□□□□□ -0.12
OPN1SWP03999 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.32□□□□□ -0.12
OPN1SWP03999 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.32□□□□□ -0.12
OPN1SWP03999 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.32□□□□□ -0.12
OPN1SWP03999 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.32□□□□□ -0.12
OPN1SWP03999 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
OPN1SWP03999 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.32□□□□□ -0.12
OPN1SWP03999 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms