Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 FTH1P22-201ENST00000456305 520 ntBASIC17.13■□□□□ 0.33
ALDH1A1P00352 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 AC244250.3-201ENST00000620749 366 ntBASIC17.13■□□□□ 0.33
ALDH1A1P00352 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 LINC01165-201ENST00000445190 1623 ntBASIC17.13■□□□□ 0.33
ALDH1A1P00352 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ALDH1A1P00352 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALDH1A1P00352 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AC004837.1-201ENST00000446267 564 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 ORAOV1P1-201ENST00000503108 395 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 MIR5196-201ENST00000578146 115 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AC011247.3-201ENST00000603297 438 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 AP003392.6-201ENST00000607709 325 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 AC073592.2-201ENST00000623062 780 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 AC106820.2-201ENST00000563775 3264 ntBASIC17.12■□□□□ 0.33
ALDH1A1P00352 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALDH1A1P00352 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.12■□□□□ 0.33
ALDH1A1P00352 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 GCSHP3-201ENST00000431120 391 ntBASIC17.11■□□□□ 0.33
ALDH1A1P00352 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ALDH1A1P00352 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.11■□□□□ 0.33
ALDH1A1P00352 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms