Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.32□□□□□ -0.28
UPK1BO75841 HOMER2P1-201ENST00000455653 964 ntBASIC13.32□□□□□ -0.28
UPK1BO75841 PHKG1P2-201ENST00000457537 863 ntBASIC13.32□□□□□ -0.28
UPK1BO75841 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.32□□□□□ -0.28
UPK1BO75841 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 AC139887.4-201ENST00000607877 719 ntBASIC13.32□□□□□ -0.28
UPK1BO75841 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
UPK1BO75841 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.32□□□□□ -0.28
UPK1BO75841 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.32□□□□□ -0.28
UPK1BO75841 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
UPK1BO75841 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UPK1BO75841 AGGF1P1-201ENST00000509500 2073 ntBASIC13.32□□□□□ -0.28
UPK1BO75841 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UPK1BO75841 REXO1L4P-201ENST00000605109 1937 ntBASIC13.31□□□□□ -0.28
UPK1BO75841 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 AL031595.1-201ENST00000623969 4709 ntBASIC13.31□□□□□ -0.28
UPK1BO75841 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 AC073439.1-201ENST00000624121 1774 ntBASIC13.31□□□□□ -0.28
UPK1BO75841 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK1BO75841 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.31□□□□□ -0.28
UPK1BO75841 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 MIR4651-201ENST00000582622 73 ntBASIC13.31□□□□□ -0.28
UPK1BO75841 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 AC004706.3-202ENST00000621574 984 ntBASIC13.31□□□□□ -0.28
UPK1BO75841 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.31□□□□□ -0.28
UPK1BO75841 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
UPK1BO75841 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UPK1BO75841 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
UPK1BO75841 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.3□□□□□ -0.28
UPK1BO75841 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms