Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PMPCBO75439 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 MYCLP2-201ENST00000449268 967 ntBASIC15.55■□□□□ 0.08
PMPCBO75439 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.55■□□□□ 0.08
PMPCBO75439 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.55■□□□□ 0.08
PMPCBO75439 API5-211ENST00000534695 560 ntTSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
PMPCBO75439 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.55■□□□□ 0.08
PMPCBO75439 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.55■□□□□ 0.08
PMPCBO75439 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 AC008494.3-201ENST00000606615 944 ntBASIC15.55■□□□□ 0.08
PMPCBO75439 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.55■□□□□ 0.08
PMPCBO75439 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PMPCBO75439 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.54■□□□□ 0.08
PMPCBO75439 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.54■□□□□ 0.08
PMPCBO75439 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 AC007787.1-201ENST00000588095 1583 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PMPCBO75439 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PMPCBO75439 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.54■□□□□ 0.08
PMPCBO75439 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PMPCBO75439 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PMPCBO75439 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.54■□□□□ 0.08
PMPCBO75439 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
PMPCBO75439 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.54■□□□□ 0.08
PMPCBO75439 TERF1P3-201ENST00000505638 1227 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.54■□□□□ 0.08
PMPCBO75439 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.54■□□□□ 0.08
PMPCBO75439 AC092552.1-201ENST00000547243 906 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 AC120045.2-201ENST00000567334 178 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.54■□□□□ 0.08
PMPCBO75439 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
PMPCBO75439 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 CICP24-201ENST00000605464 2705 ntBASIC15.54■□□□□ 0.08
PMPCBO75439 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PMPCBO75439 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PMPCBO75439 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PMPCBO75439 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.53■□□□□ 0.08
PMPCBO75439 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PMPCBO75439 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.53■□□□□ 0.08
PMPCBO75439 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms