Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF40O75150 AC044860.1-202ENST00000559481 777 ntBASIC16.61■□□□□ 0.25
RNF40O75150 AL390728.6-201ENST00000566446 1246 ntBASIC16.61■□□□□ 0.25
RNF40O75150 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.61■□□□□ 0.25
RNF40O75150 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF40O75150 AC004790.1-201ENST00000612686 536 ntBASIC16.61■□□□□ 0.25
RNF40O75150 IGHV3-72-202ENST00000621503 303 ntBASIC16.61■□□□□ 0.25
RNF40O75150 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 AL391825.1-201ENST00000457671 1364 ntBASIC16.61■□□□□ 0.25
RNF40O75150 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF40O75150 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RNF40O75150 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF40O75150 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.6■□□□□ 0.25
RNF40O75150 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF40O75150 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF40O75150 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 HLA-V-201ENST00000429037 534 ntBASIC16.6■□□□□ 0.25
RNF40O75150 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF40O75150 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 RN7SL752P-201ENST00000463779 287 ntBASIC16.6■□□□□ 0.25
RNF40O75150 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF40O75150 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF40O75150 SPDYE18-201ENST00000510091 1050 ntBASIC16.6■□□□□ 0.25
RNF40O75150 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RNF40O75150 WASH4P-201ENST00000564273 1246 ntBASIC16.6■□□□□ 0.25
RNF40O75150 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF40O75150 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 AC008494.3-201ENST00000606615 944 ntBASIC16.6■□□□□ 0.25
RNF40O75150 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF40O75150 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RNF40O75150 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF40O75150 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
RNF40O75150 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
RNF40O75150 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF40O75150 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF40O75150 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF40O75150 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF40O75150 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF40O75150 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF40O75150 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
RNF40O75150 SERBP1P3-201ENST00000459980 809 ntBASIC16.59■□□□□ 0.25
RNF40O75150 AC093004.1-201ENST00000508850 424 ntBASIC16.59■□□□□ 0.25
RNF40O75150 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF40O75150 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF40O75150 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF40O75150 RN7SL371P-201ENST00000578099 267 ntBASIC16.59■□□□□ 0.25
RNF40O75150 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF40O75150 CHCHD2P3-201ENST00000603038 451 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms