Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CXCL13O43927 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.67□□□□□ -0.22
CXCL13O43927 AC092384.3-202ENST00000564646 2873 ntBASIC13.67□□□□□ -0.22
CXCL13O43927 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 KRT8P14-201ENST00000414254 1442 ntBASIC13.67□□□□□ -0.22
CXCL13O43927 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 AC092933.1-201ENST00000393644 945 ntBASIC13.67□□□□□ -0.22
CXCL13O43927 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CXCL13O43927 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.67□□□□□ -0.22
CXCL13O43927 ACA64.2-201ENST00000459014 129 ntBASIC13.67□□□□□ -0.22
CXCL13O43927 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CXCL13O43927 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCL13O43927 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.67□□□□□ -0.22
CXCL13O43927 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
CXCL13O43927 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CXCL13O43927 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CXCL13O43927 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CXCL13O43927 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 AL360270.3-201ENST00000609118 1348 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL13O43927 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL13O43927 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL13O43927 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCL13O43927 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCL13O43927 HLA-K-203ENST00000430151 1046 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 AC007551.1-201ENST00000457394 519 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.66□□□□□ -0.22
CXCL13O43927 FTH1P14-201ENST00000482930 551 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL13O43927 IGHV3-71-201ENST00000523324 359 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCL13O43927 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL13O43927 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.66□□□□□ -0.22
CXCL13O43927 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CXCL13O43927 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 LINC00554-201ENST00000564841 3011 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 AP000845.1-201ENST00000581677 2131 ntBASIC13.66□□□□□ -0.22
CXCL13O43927 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
CXCL13O43927 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CXCL13O43927 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms