Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SOCS2P1-201ENST00000417727 557 ntBASIC13.63□□□□□ -0.23
TRAF3IP2O43734 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.63□□□□□ -0.23
TRAF3IP2O43734 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 CTBP2P3-201ENST00000585629 1255 ntBASIC13.63□□□□□ -0.23
TRAF3IP2O43734 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 LINC02084-201ENST00000606069 1096 ntBASIC13.63□□□□□ -0.23
TRAF3IP2O43734 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF3IP2O43734 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AL157414.3-201ENST00000624276 1954 ntBASIC13.62□□□□□ -0.23
TRAF3IP2O43734 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 HLA-K-203ENST00000430151 1046 ntBASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 CRB3P1-201ENST00000449338 276 ntBASIC13.62□□□□□ -0.23
TRAF3IP2O43734 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 TP53TG3HP-202ENST00000569755 579 ntBASIC13.62□□□□□ -0.23
TRAF3IP2O43734 SPDYE22P-201ENST00000582158 798 ntBASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 BX539320.1-201ENST00000623759 877 ntBASIC13.62□□□□□ -0.23
TRAF3IP2O43734 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
TRAF3IP2O43734 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 LILRP1-201ENST00000444199 1370 ntBASIC13.61□□□□□ -0.23
TRAF3IP2O43734 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF3IP2O43734 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms