Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AL133267.1-201ENST00000398220 340 ntBASIC13.98□□□□□ -0.17
RNF13O43567 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.98□□□□□ -0.17
RNF13O43567 AC092580.3-201ENST00000430932 139 ntBASIC13.98□□□□□ -0.17
RNF13O43567 RPL13P2-201ENST00000440687 659 ntBASIC13.98□□□□□ -0.17
RNF13O43567 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.98□□□□□ -0.17
RNF13O43567 TIMM17BP1-201ENST00000545713 516 ntBASIC13.98□□□□□ -0.17
RNF13O43567 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.98□□□□□ -0.17
RNF13O43567 AC015910.1-201ENST00000579400 975 ntBASIC13.98□□□□□ -0.17
RNF13O43567 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.98□□□□□ -0.17
RNF13O43567 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RNF13O43567 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNF13O43567 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.98□□□□□ -0.17
RNF13O43567 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RNF13O43567 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.98□□□□□ -0.17
RNF13O43567 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RNF13O43567 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RNF13O43567 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
RNF13O43567 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.97□□□□□ -0.17
RNF13O43567 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 AC044860.1-202ENST00000559481 777 ntBASIC13.97□□□□□ -0.17
RNF13O43567 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RNF13O43567 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.97□□□□□ -0.17
RNF13O43567 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
RNF13O43567 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RNF13O43567 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.97□□□□□ -0.17
RNF13O43567 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RNF13O43567 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RNF13O43567 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms