Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 AL359258.3-201ENST00000622910 2331 ntBASIC14.75□□□□□ -0.05
SLC28A1O00337 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A1O00337 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SLC28A1O00337 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
SLC28A1O00337 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A1O00337 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.74□□□□□ -0.05
SLC28A1O00337 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.74□□□□□ -0.05
SLC28A1O00337 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC28A1O00337 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 AC092337.1-201ENST00000568699 1129 ntBASIC14.74□□□□□ -0.05
SLC28A1O00337 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A1O00337 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC28A1O00337 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 INTS4P1-203ENST00000641008 3683 ntBASIC14.74□□□□□ -0.05
SLC28A1O00337 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A1O00337 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A1O00337 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A1O00337 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC28A1O00337 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC28A1O00337 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A1O00337 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SLC28A1O00337 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A1O00337 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.73□□□□□ -0.05
SLC28A1O00337 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC28A1O00337 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC28A1O00337 KRT18P13-201ENST00000400056 1290 ntBASIC14.73□□□□□ -0.05
SLC28A1O00337 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A1O00337 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
SLC28A1O00337 AC114501.2-201ENST00000439631 535 ntBASIC14.73□□□□□ -0.05
SLC28A1O00337 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC28A1O00337 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.73□□□□□ -0.05
SLC28A1O00337 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A1O00337 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A1O00337 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A1O00337 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SLC28A1O00337 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A1O00337 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.73□□□□□ -0.05
SLC28A1O00337 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms