Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PCDHA3-202ENST00000532566 4594 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AL157414.3-201ENST00000624276 1954 ntBASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC108725.1-201ENST00000495472 409 ntBASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 C2orf69P2-201ENST00000562032 1123 ntBASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RN7SL713P-201ENST00000582127 302 ntBASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC015818.8-201ENST00000587907 1519 ntBASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 AC079178.1-201ENST00000420915 656 ntBASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C1QTNF3-AMACRE9PGA6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms