Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 RN7SL147P-201ENST00000487345 298 ntBASIC18.61■□□□□ 0.57
RGPD3A6NKT7 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 AL133467.4-201ENST00000602953 725 ntBASIC18.61■□□□□ 0.57
RGPD3A6NKT7 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.61■□□□□ 0.57
RGPD3A6NKT7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 AP002353.1-201ENST00000528257 1599 ntBASIC18.61■□□□□ 0.57
RGPD3A6NKT7 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC18.61■□□□□ 0.57
RGPD3A6NKT7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 KRT18P4-201ENST00000422599 1288 ntBASIC18.6■□□□□ 0.57
RGPD3A6NKT7 SOD2-205ENST00000444946 917 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AL160191.2-201ENST00000603975 601 ntBASIC18.6■□□□□ 0.57
RGPD3A6NKT7 REXO1L2P-201ENST00000425429 2069 ntBASIC18.6■□□□□ 0.57
RGPD3A6NKT7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 AC080080.1-201ENST00000625121 2420 ntBASIC18.6■□□□□ 0.57
RGPD3A6NKT7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RGPD3A6NKT7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 FLJ38576-201ENST00000623820 2459 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 WASH3P-207ENST00000560956 1394 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 RN7SL767P-201ENST00000493013 295 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 AC008026.2-201ENST00000495438 348 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 BCL2L12P1-201ENST00000508390 733 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 GOLGA2P7-209ENST00000560408 745 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 AL513523.2-202ENST00000427283 2040 ntBASIC18.59■□□□□ 0.57
RGPD3A6NKT7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RGPD3A6NKT7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms