Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 AL132655.2-201ENST00000596276 594 ntBASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 MIR600HG-201ENST00000449175 5984 ntBASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 AL138799.1-201ENST00000448213 1675 ntBASIC15.32■□□□□ 0.04
CCDC162PA2VCL2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 CICP23-201ENST00000605013 2741 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC013726.1-201ENST00000563747 2285 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC236430.1-201ENST00000402231 743 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AL353779.1-201ENST00000434793 351 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 FAM207CP-201ENST00000443486 507 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC104596.2-201ENST00000512793 793 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC123567.1-201ENST00000548294 1261 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 CHCHD2P3-201ENST00000603038 451 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC093726.1-201ENST00000608064 963 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC008761.3-201ENST00000624803 892 ntBASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC162PA2VCL2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC162PA2VCL2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms