Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HFM1A2PYH4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HFM1A2PYH4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC22.2■■□□□ 1.15
HFM1A2PYH4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 AL118558.3-201ENST00000607414 1079 ntBASIC22.2■■□□□ 1.14
HFM1A2PYH4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 Z98259.2-201ENST00000641583 609 ntBASIC22.2■■□□□ 1.14
HFM1A2PYH4 POR-201ENST00000394893 2532 ntTSL 5 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HFM1A2PYH4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
HFM1A2PYH4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 AC018442.1-201ENST00000421439 2061 ntBASIC22.19■■□□□ 1.14
HFM1A2PYH4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 HNRNPA1P63-201ENST00000427917 963 ntBASIC22.19■■□□□ 1.14
HFM1A2PYH4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 DUX4L46-201ENST00000566845 751 ntBASIC22.19■■□□□ 1.14
HFM1A2PYH4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC22.19■■□□□ 1.14
HFM1A2PYH4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HFM1A2PYH4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 HNRNPA1P32-201ENST00000396326 963 ntBASIC22.18■■□□□ 1.14
HFM1A2PYH4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 AC005324.6-201ENST00000587972 613 ntBASIC22.18■■□□□ 1.14
HFM1A2PYH4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 AC046158.3-201ENST00000624947 2558 ntBASIC22.18■■□□□ 1.14
HFM1A2PYH4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 KRT8P28-201ENST00000433288 1390 ntBASIC22.18■■□□□ 1.14
HFM1A2PYH4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
HFM1A2PYH4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HFM1A2PYH4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 AL645933.1-201ENST00000440087 609 ntBASIC22.17■■□□□ 1.14
HFM1A2PYH4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 AC244394.1-201ENST00000435000 1665 ntBASIC22.17■■□□□ 1.14
HFM1A2PYH4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC22.17■■□□□ 1.14
HFM1A2PYH4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HFM1A2PYH4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms