Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 CROCCP4-201ENST00000457096 498 ntBASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 VDAC1P7-201ENST00000462417 847 ntBASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPDC1A2A3K4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SOCS2P1-201ENST00000417727 557 ntBASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 AC022210.1-201ENST00000449856 793 ntBASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 TDH-203ENST00000531764 1110 ntBASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPDC1A2A3K4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPDC1A2A3K4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPDC1A2A3K4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 C1QBPP1-201ENST00000400117 770 ntBASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 USP32P1-208ENST00000506594 1164 ntBASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 AC124283.3-201ENST00000570869 594 ntBASIC17.95■□□□□ 0.46
PTPDC1A2A3K4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms