Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AL607033.1-201ENST00000623900 1599 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC136604.1-201ENST00000418535 575 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 RBPMS2P1-201ENST00000437762 623 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AP000344.2-201ENST00000512987 629 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 MIR3687-2-201ENST00000577708 61 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC010327.4-202ENST00000591484 748 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 MIR3687-1-201ENST00000614492 61 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 AL031595.1-201ENST00000623969 4709 ntBASIC14.83□□□□□ -0.04
RNF103-CHMP3A0A140T963 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC131212.3-201ENST00000624087 4219 ntBASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 GPS2P2-201ENST00000430745 888 ntBASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 SPDYE14P-201ENST00000442619 822 ntBASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC004835.2-201ENST00000603762 682 ntBASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF103-CHMP3A0A140T963 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.81□□□□□ -0.04
RNF103-CHMP3A0A140T963 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms