Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 BASP1P1-201ENST00000430708 665 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AC055876.3-201ENST00000431496 288 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AC093214.1-201ENST00000511688 1107 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AL844908.2-201ENST00000609461 460 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AC138649.4-201ENST00000612222 287 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AC007686.3-201ENST00000619017 3487 ntBASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.16□□□□□ -0.62
TRGV1A0A0A0MS02 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC138969.3-201ENST00000546612 1459 ntBASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC138932.2-201ENST00000548268 1459 ntBASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC126755.4-201ENST00000549796 1459 ntBASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC135586.1-201ENST00000539323 574 ntBASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC004461.2-201ENST00000629517 803 ntBASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRGV1A0A0A0MS02 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms