Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 ALG1L6P-201ENST00000515248 758 ntBASIC17■□□□□ 0.31
PTCH2Q9Y6C5 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 AC084364.1-201ENST00000551967 1556 ntBASIC17■□□□□ 0.31
PTCH2Q9Y6C5 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 MIR4522-201ENST00000584932 87 ntBASIC17■□□□□ 0.31
PTCH2Q9Y6C5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 AL157813.1-201ENST00000612996 587 ntBASIC17■□□□□ 0.31
PTCH2Q9Y6C5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 CYP2T1P-202ENST00000641596 2535 ntBASIC17■□□□□ 0.31
PTCH2Q9Y6C5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC17■□□□□ 0.31
PTCH2Q9Y6C5 AC084018.2-201ENST00000613093 2607 ntBASIC17■□□□□ 0.31
PTCH2Q9Y6C5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 FRMPD2B-201ENST00000431305 1347 ntBASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AL583805.1-201ENST00000391389 531 ntBASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 NDUFS6P1-201ENST00000485187 316 ntBASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AC026410.1-201ENST00000507366 1101 ntBASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AC107464.3-201ENST00000609172 737 ntBASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PTCH2Q9Y6C5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AL662844.4-201ENST00000606367 2838 ntBASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AL627422.1-201ENST00000434104 580 ntBASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 LYPLA2P1-203ENST00000447689 696 ntBASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AP000358.1-201ENST00000456260 156 ntBASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 CHCHD2P9-201ENST00000461726 456 ntBASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 MIR5196-201ENST00000578146 115 ntBASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PTCH2Q9Y6C5 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms