Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTDP1Q9Y5B0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CTDP1Q9Y5B0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CTDP1Q9Y5B0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 HYMAI-201ENST00000635591 3347 ntBASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTDP1Q9Y5B0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 AL139384.1-201ENST00000612143 3047 ntBASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 FAM8A4P-201ENST00000435433 1213 ntBASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 MTX1P1-201ENST00000440904 838 ntBASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 FAM86HP-204ENST00000513466 959 ntBASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 AC103810.3-201ENST00000583567 96 ntBASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 AL022328.3-201ENST00000607943 679 ntBASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTDP1Q9Y5B0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.62■□□□□ 0.41
CTDP1Q9Y5B0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms