Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 CU639417.3-201ENST00000624240 1404 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AL139094.1-201ENST00000405549 1188 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 KLF2P2-201ENST00000416807 1039 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 TDH-203ENST00000531764 1110 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AP001063.1-201ENST00000568332 529 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AC006058.4-201ENST00000624016 1670 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 AL137783.1-201ENST00000623494 1896 ntBASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
DTX4Q9Y2E6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AL645937.2-201ENST00000396808 931 ntBASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AL512384.1-201ENST00000406683 331 ntBASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 ACTG1P3-201ENST00000431775 1114 ntBASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AC011495.1-201ENST00000498085 584 ntBASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AC022137.2-201ENST00000503482 481 ntBASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 AL358472.5-202ENST00000641448 1267 ntBASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
DTX4Q9Y2E6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
DTX4Q9Y2E6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms