Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC078925.2-201ENST00000624013 1973 ntBASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 MIR648-201ENST00000385046 94 ntBASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AL109837.1-201ENST00000603272 613 ntBASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AC008825.2-201ENST00000603374 718 ntBASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AP003392.6-201ENST00000607709 325 ntBASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AC132872.4-202ENST00000622924 2756 ntBASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 AL008718.2-201ENST00000609206 1313 ntBASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.27■□□□□ 0.52
ZC3H4Q9UPT8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H4Q9UPT8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H4Q9UPT8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H4Q9UPT8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZC3H4Q9UPT8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 E2F3P2-201ENST00000447755 1422 ntBASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 AC022188.1-201ENST00000620960 1664 ntBASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZC3H4Q9UPT8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms