Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 VDAC1P7-201ENST00000462417 847 ntBASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 ZNF767P-206ENST00000513792 565 ntBASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 AC000095.1-201ENST00000603208 874 ntBASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 AL022328.3-201ENST00000607943 679 ntBASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 AC005252.2-201ENST00000624630 1141 ntBASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 AL607033.1-201ENST00000623900 1599 ntBASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDZRN3Q9UPQ7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AGAP7P-201ENST00000582299 2062 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AGAP14-201ENST00000624701 2060 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 LINC00528-201ENST00000600723 2160 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 CALR4P-201ENST00000431943 946 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AP001258.2-201ENST00000529891 490 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AC009542.2-202ENST00000619004 1067 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 AC099063.4-201ENST00000641099 1602 ntBASIC19.69■□□□□ 0.74
PDZRN3Q9UPQ7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AC126365.1-201ENST00000578585 1514 ntBASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 FAM86HP-204ENST00000513466 959 ntBASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.68■□□□□ 0.74
PDZRN3Q9UPQ7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms