Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GIMAP3P-201ENST00000495150 836 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 MIR3197-201ENST00000582241 73 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AC027307.3-201ENST00000594262 1100 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AL390755.1-201ENST00000623716 2027 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AC023090.2-201ENST00000625182 2110 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC3Q9UN70 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC3Q9UN70 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC3Q9UN70 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDHGC3Q9UN70 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDHGC3Q9UN70 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 CICP14-201ENST00000629111 2732 ntBASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 AC018442.1-201ENST00000421439 2061 ntBASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 AC010740.1-201ENST00000417035 684 ntBASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDHGC3Q9UN70 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 KRT18P25-201ENST00000508931 1278 ntBASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGC3Q9UN70 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms