Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 GRK6P1-201ENST00000400595 1711 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 MIR770-201ENST00000390219 98 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AL133267.1-201ENST00000398220 340 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC015922.1-201ENST00000421102 1152 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 HNRNPUP1-201ENST00000554987 333 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC010336.2-201ENST00000564226 506 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC138969.3-201ENST00000546612 1459 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC138932.2-201ENST00000548268 1459 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC126755.4-201ENST00000549796 1459 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC073347.1-201ENST00000421633 2643 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LINC00474Q9P2X8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 DKFZP434H168-201ENST00000567381 1905 ntBASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LINC00474Q9P2X8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms