Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
MKS1Q9NXB0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
MKS1Q9NXB0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MKS1Q9NXB0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 AC016397.2-201ENST00000624848 1985 ntBASIC15.08■□□□□ 0
MKS1Q9NXB0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.08■□□□□ 0
MKS1Q9NXB0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.08■□□□□ 0
MKS1Q9NXB0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.08■□□□□ 0
MKS1Q9NXB0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.08■□□□□ 0
MKS1Q9NXB0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.08■□□□□ 0
MKS1Q9NXB0 AP000344.2-201ENST00000512987 629 ntBASIC15.08■□□□□ 0
MKS1Q9NXB0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.08■□□□□ 0
MKS1Q9NXB0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
MKS1Q9NXB0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
MKS1Q9NXB0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.08■□□□□ 0
MKS1Q9NXB0 MIR6080-201ENST00000617359 66 ntBASIC15.08■□□□□ 0
MKS1Q9NXB0 AP001059.3-201ENST00000619053 235 ntBASIC15.08■□□□□ 0
MKS1Q9NXB0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.08■□□□□ 0
MKS1Q9NXB0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.08■□□□□ 0
MKS1Q9NXB0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.08■□□□□ 0
MKS1Q9NXB0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.08■□□□□ 0
MKS1Q9NXB0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.08■□□□□ 0
MKS1Q9NXB0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 KRT8P22-201ENST00000562317 1415 ntBASIC15.08■□□□□ 0
MKS1Q9NXB0 AC010327.5-201ENST00000586923 3061 ntBASIC15.08■□□□□ 0
MKS1Q9NXB0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MKS1Q9NXB0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
MKS1Q9NXB0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
MKS1Q9NXB0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.07■□□□□ 0
MKS1Q9NXB0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.07■□□□□ 0
MKS1Q9NXB0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
MKS1Q9NXB0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 RPL37AP1-201ENST00000412502 279 ntBASIC15.07■□□□□ 0
MKS1Q9NXB0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.07■□□□□ 0
MKS1Q9NXB0 SPDYE7P-202ENST00000420373 878 ntBASIC15.07■□□□□ 0
MKS1Q9NXB0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.07■□□□□ 0
MKS1Q9NXB0 HLA-K-203ENST00000430151 1046 ntBASIC15.07■□□□□ 0
MKS1Q9NXB0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.07■□□□□ 0
MKS1Q9NXB0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.07■□□□□ 0
MKS1Q9NXB0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.07■□□□□ 0
MKS1Q9NXB0 AL512361.1-201ENST00000554200 418 ntBASIC15.07■□□□□ 0
MKS1Q9NXB0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.07■□□□□ 0
MKS1Q9NXB0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
MKS1Q9NXB0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 AL157414.3-201ENST00000624276 1954 ntBASIC15.07■□□□□ 0
MKS1Q9NXB0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.07■□□□□ 0
MKS1Q9NXB0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.07■□□□□ 0
MKS1Q9NXB0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MKS1Q9NXB0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.06■□□□□ 0
MKS1Q9NXB0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
MKS1Q9NXB0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.06■□□□□ 0
MKS1Q9NXB0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.06■□□□□ 0
MKS1Q9NXB0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.06■□□□□ 0
MKS1Q9NXB0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.06■□□□□ 0
MKS1Q9NXB0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.06■□□□□ 0
MKS1Q9NXB0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms