Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MIR8072-201ENST00000614241 80 ntBASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 AC126177.1-201ENST00000547829 2218 ntBASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.75□□□□□ -0.21
PARPBPQ9NWS1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 INTS4P2-202ENST00000614726 2019 ntBASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC104581.4-201ENST00000623126 3052 ntBASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SOCS2P1-201ENST00000417727 557 ntBASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 COX20P2-201ENST00000452636 358 ntBASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 VDAC1P7-201ENST00000462417 847 ntBASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC025048.6-201ENST00000634326 1161 ntBASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PARPBPQ9NWS1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 DRD5P1-201ENST00000456605 1438 ntBASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PARPBPQ9NWS1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms